How to remove outliers from a Pandas DataFrame in Python

An outlier of a dataset is defined as a value that is more than 3 standard deviations from the mean. Removing outliers from a pandas.DataFrame removes any rows in the DataFrame which contain an outlier. Outlier calculations are performed separately for each column.

Solution for How to remove outliers from a Pandas DataFrame in Python : You can use scipy.stats.zscore() to remove outliers from a DataFrame Call scipy.stats.zscore(a) with a as a DataFrame to get a NumPy array containing the z-score of each value in a. Call numpy.abs(x) with x as the previous result to convert each element in x to its absolute value. Use the syntax (array < 3).all(axis=1) with array as the previous result to create a boolean array. Filter the original DataFrame with this result.

Note that a value is removed if it is an outlier in its column, not necessarily the entire DataFrame.


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